Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.7■□□□□ 0.58
KRT3P12035 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
KRT3P12035 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT3P12035 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT3P12035 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.7■□□□□ 0.58
KRT3P12035 AC124864.1-201ENST00000623408 392 ntBASIC18.7■□□□□ 0.58
KRT3P12035 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT3P12035 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
KRT3P12035 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.7■□□□□ 0.58
KRT3P12035 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.7■□□□□ 0.58
KRT3P12035 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.7■□□□□ 0.58
KRT3P12035 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 AC133963.1-201ENST00000504166 1679 ntBASIC18.69■□□□□ 0.58
KRT3P12035 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 AL592071.1-201ENST00000611956 408 ntBASIC18.69■□□□□ 0.58
KRT3P12035 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.69■□□□□ 0.58
KRT3P12035 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
KRT3P12035 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KRT3P12035 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 REXO1L11P-201ENST00000620964 1927 ntBASIC18.68■□□□□ 0.58
KRT3P12035 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT3P12035 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KRT3P12035 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.68■□□□□ 0.58
KRT3P12035 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.68■□□□□ 0.58
KRT3P12035 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT3P12035 BX276092.5-203ENST00000456199 560 ntBASIC18.68■□□□□ 0.58
KRT3P12035 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT3P12035 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
KRT3P12035 AC116407.4-201ENST00000623319 1061 ntBASIC18.68■□□□□ 0.58
KRT3P12035 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.68■□□□□ 0.58
KRT3P12035 LINC00304-203ENST00000565008 1864 ntBASIC18.68■□□□□ 0.58
KRT3P12035 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT3P12035 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KRT3P12035 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.68■□□□□ 0.58
KRT3P12035 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT3P12035 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT3P12035 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
KRT3P12035 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT3P12035 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 PCED1CP-201ENST00000419887 785 ntBASIC18.67■□□□□ 0.58
KRT3P12035 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.67■□□□□ 0.58
KRT3P12035 AL121672.3-201ENST00000608644 468 ntBASIC18.67■□□□□ 0.58
KRT3P12035 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.67■□□□□ 0.58
KRT3P12035 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.67■□□□□ 0.58
KRT3P12035 BX276092.7-203ENST00000637198 1536 ntBASIC18.67■□□□□ 0.58
KRT3P12035 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.67■□□□□ 0.58
KRT3P12035 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
KRT3P12035 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KRT3P12035 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
KRT3P12035 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms