Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.92■□□□□ 0.78
TPM3P06753 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM3P06753 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
TPM3P06753 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.92■□□□□ 0.78
TPM3P06753 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.92■□□□□ 0.78
TPM3P06753 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM3P06753 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TPM3P06753 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC19.92■□□□□ 0.78
TPM3P06753 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TPM3P06753 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
TPM3P06753 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM3P06753 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TPM3P06753 LINC01126-201ENST00000623515 1646 ntBASIC19.91■□□□□ 0.78
TPM3P06753 PCDH8P1-201ENST00000428983 2773 ntBASIC19.91■□□□□ 0.78
TPM3P06753 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TPM3P06753 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
TPM3P06753 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TPM3P06753 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM3P06753 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 AC090192.1-201ENST00000517740 490 ntBASIC19.91■□□□□ 0.78
TPM3P06753 KRT18P6-201ENST00000555540 1265 ntBASIC19.91■□□□□ 0.78
TPM3P06753 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.91■□□□□ 0.78
TPM3P06753 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 AL135905.2-201ENST00000584934 1404 ntBASIC19.91■□□□□ 0.78
TPM3P06753 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TPM3P06753 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TPM3P06753 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TPM3P06753 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TPM3P06753 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.91■□□□□ 0.78
TPM3P06753 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM3P06753 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM3P06753 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TPM3P06753 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.9■□□□□ 0.78
TPM3P06753 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM3P06753 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM3P06753 DUTP2-201ENST00000519164 463 ntBASIC19.9■□□□□ 0.78
TPM3P06753 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.9■□□□□ 0.78
TPM3P06753 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.9■□□□□ 0.78
TPM3P06753 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 CICP6-201ENST00000457191 2729 ntBASIC19.9■□□□□ 0.78
TPM3P06753 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
TPM3P06753 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TPM3P06753 HLA-J-201ENST00000462773 1622 ntBASIC19.9■□□□□ 0.78
TPM3P06753 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TPM3P06753 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TPM3P06753 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM3P06753 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
TPM3P06753 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
TPM3P06753 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.89■□□□□ 0.77
TPM3P06753 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.89■□□□□ 0.77
TPM3P06753 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 MIR3180-4-201ENST00000582223 153 ntBASIC19.89■□□□□ 0.77
TPM3P06753 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TPM3P06753 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TPM3P06753 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
TPM3P06753 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TPM3P06753 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms