Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC100803.2-201ENST00000562459 1963 ntBASIC16.2■□□□□ 0.18
P04436 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.2■□□□□ 0.18
P04436 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
P04436 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
P04436 BX276092.7-203ENST00000637198 1536 ntBASIC16.19■□□□□ 0.18
P04436 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
P04436 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
P04436 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P04436 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.19■□□□□ 0.18
P04436 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
P04436 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.19■□□□□ 0.18
P04436 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
P04436 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.19■□□□□ 0.18
P04436 FDX1P1-201ENST00000449115 551 ntBASIC16.19■□□□□ 0.18
P04436 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
P04436 AC073648.2-201ENST00000510116 352 ntBASIC16.19■□□□□ 0.18
P04436 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.19■□□□□ 0.18
P04436 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 AC138028.4-201ENST00000564984 1845 ntBASIC16.19■□□□□ 0.18
P04436 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
P04436 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
P04436 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
P04436 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
P04436 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
P04436 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.18■□□□□ 0.18
P04436 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
P04436 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
P04436 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.18■□□□□ 0.18
P04436 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.18■□□□□ 0.18
P04436 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.18■□□□□ 0.18
P04436 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
P04436 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.18■□□□□ 0.18
P04436 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.18■□□□□ 0.18
P04436 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.18■□□□□ 0.18
P04436 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.18■□□□□ 0.18
P04436 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 KRT18P55-202ENST00000578578 1546 ntBASIC16.18■□□□□ 0.18
P04436 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
P04436 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.18■□□□□ 0.18
P04436 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.18■□□□□ 0.18
P04436 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.18■□□□□ 0.18
P04436 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
P04436 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
P04436 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 AC009949.1-201ENST00000623048 1830 ntBASIC16.17■□□□□ 0.18
P04436 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.17■□□□□ 0.18
P04436 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
P04436 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.17■□□□□ 0.18
P04436 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
P04436 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
P04436 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
P04436 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.17■□□□□ 0.18
P04436 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
P04436 FGFR3P6-201ENST00000457012 610 ntBASIC16.17■□□□□ 0.18
P04436 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.17■□□□□ 0.18
P04436 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.17■□□□□ 0.18
P04436 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms