Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNA1P02708 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 PRSS29P-201ENST00000440800 595 ntBASIC19.2■□□□□ 0.66
CHRNA1P02708 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNA1P02708 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.2■□□□□ 0.66
CHRNA1P02708 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.2■□□□□ 0.66
CHRNA1P02708 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 AC079781.4-201ENST00000641908 219 ntBASIC19.2■□□□□ 0.66
CHRNA1P02708 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.2■□□□□ 0.66
CHRNA1P02708 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHRNA1P02708 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA1P02708 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC009336.1-201ENST00000608941 1553 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA1P02708 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC097637.2-201ENST00000624096 1997 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC211486.1-202ENST00000416371 468 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 PMS2P2-201ENST00000425039 1128 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC211476.1-201ENST00000503899 468 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 IGHV3-52-201ENST00000519770 353 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA1P02708 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRNA1P02708 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.19■□□□□ 0.66
CHRNA1P02708 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHRNA1P02708 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
CHRNA1P02708 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.19■□□□□ 0.66
CHRNA1P02708 AC002310.6-201ENST00000624451 1377 ntBASIC19.19■□□□□ 0.66
CHRNA1P02708 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CHRNA1P02708 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CHRNA1P02708 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.18■□□□□ 0.66
CHRNA1P02708 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA1P02708 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 AC005829.1-201ENST00000570002 483 ntBASIC19.18■□□□□ 0.66
CHRNA1P02708 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 AL513190.1-201ENST00000621254 727 ntBASIC19.18■□□□□ 0.66
CHRNA1P02708 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA1P02708 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA1P02708 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA1P02708 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA1P02708 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
CHRNA1P02708 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA1P02708 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA1P02708 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA1P02708 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 AC087289.5-201ENST00000586076 3175 ntBASIC19.17■□□□□ 0.66
CHRNA1P02708 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA1P02708 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA1P02708 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms