Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A1P02452 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.23■□□□□ 0.99
COL1A1P02452 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.23■□□□□ 0.99
COL1A1P02452 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC21.23■□□□□ 0.99
COL1A1P02452 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
COL1A1P02452 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A1P02452 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.23■□□□□ 0.99
COL1A1P02452 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COL1A1P02452 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.22■□□□□ 0.99
COL1A1P02452 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL1A1P02452 AC108073.2-201ENST00000464002 357 ntBASIC21.22■□□□□ 0.99
COL1A1P02452 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC21.22■□□□□ 0.99
COL1A1P02452 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A1P02452 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A1P02452 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A1P02452 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC21.22■□□□□ 0.99
COL1A1P02452 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.22■□□□□ 0.99
COL1A1P02452 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC21.22■□□□□ 0.99
COL1A1P02452 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.22■□□□□ 0.99
COL1A1P02452 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
COL1A1P02452 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
COL1A1P02452 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC21.22■□□□□ 0.99
COL1A1P02452 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COL1A1P02452 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COL1A1P02452 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.22■□□□□ 0.99
COL1A1P02452 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 RPS8P6-201ENST00000426177 609 ntBASIC21.21■□□□□ 0.99
COL1A1P02452 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.21■□□□□ 0.99
COL1A1P02452 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
COL1A1P02452 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 AC002310.6-201ENST00000624451 1377 ntBASIC21.21■□□□□ 0.99
COL1A1P02452 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
COL1A1P02452 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COL1A1P02452 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.2■□□□□ 0.98
COL1A1P02452 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC21.2■□□□□ 0.98
COL1A1P02452 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC21.2■□□□□ 0.98
COL1A1P02452 STK19B-204ENST00000512515 211 ntBASIC21.2■□□□□ 0.98
COL1A1P02452 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC21.2■□□□□ 0.98
COL1A1P02452 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.2■□□□□ 0.98
COL1A1P02452 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 AC005593.1-201ENST00000624894 515 ntBASIC21.2■□□□□ 0.98
COL1A1P02452 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.2■□□□□ 0.98
COL1A1P02452 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC21.2■□□□□ 0.98
COL1A1P02452 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.2■□□□□ 0.98
COL1A1P02452 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.2■□□□□ 0.98
COL1A1P02452 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COL1A1P02452 MCCD1P2-201ENST00000423228 335 ntBASIC21.2■□□□□ 0.98
COL1A1P02452 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC21.2■□□□□ 0.98
COL1A1P02452 YBX1P5-201ENST00000509441 847 ntBASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms