Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA2P01906 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
HLA-DQA2P01906 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.97■□□□□ 0.15
HLA-DQA2P01906 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.96■□□□□ 0.15
HLA-DQA2P01906 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 AC012313.1-201ENST00000593393 3059 ntBASIC15.96■□□□□ 0.15
HLA-DQA2P01906 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
HLA-DQA2P01906 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
HLA-DQA2P01906 AL355312.1-201ENST00000407115 2176 ntBASIC15.96■□□□□ 0.14
HLA-DQA2P01906 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 RPS20-210ENST00000523936 899 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 GCSHP2-201ENST00000560971 527 ntBASIC15.95■□□□□ 0.14
HLA-DQA2P01906 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.95■□□□□ 0.14
HLA-DQA2P01906 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 AC116407.2-201ENST00000613639 860 ntBASIC15.94■□□□□ 0.14
HLA-DQA2P01906 AL023973.1-201ENST00000624619 620 ntBASIC15.94■□□□□ 0.14
HLA-DQA2P01906 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
HLA-DQA2P01906 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms