Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.18■□□□□ 0.5
MT-CO1P00395 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.18■□□□□ 0.5
MT-CO1P00395 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-CO1P00395 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.18■□□□□ 0.5
MT-CO1P00395 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-CO1P00395 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.18■□□□□ 0.5
MT-CO1P00395 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
MT-CO1P00395 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MT-CO1P00395 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MT-CO1P00395 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 TPM4P1-201ENST00000436100 807 ntBASIC18.17■□□□□ 0.5
MT-CO1P00395 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.17■□□□□ 0.5
MT-CO1P00395 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 AC114341.1-201ENST00000618070 349 ntBASIC18.17■□□□□ 0.5
MT-CO1P00395 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.17■□□□□ 0.5
MT-CO1P00395 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-CO1P00395 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-CO1P00395 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-CO1P00395 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.16■□□□□ 0.5
MT-CO1P00395 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO1P00395 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-CO1P00395 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO1P00395 AC009533.2-201ENST00000543664 586 ntBASIC18.16■□□□□ 0.5
MT-CO1P00395 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO1P00395 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.16■□□□□ 0.5
MT-CO1P00395 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-CO1P00395 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 AL591684.3-201ENST00000605187 298 ntBASIC18.16■□□□□ 0.5
MT-CO1P00395 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
MT-CO1P00395 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 AC022898.2-201ENST00000616822 1312 ntBASIC18.16■□□□□ 0.5
MT-CO1P00395 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-CO1P00395 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-CO1P00395 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms