Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.34■□□□□ 0.85
MBD3O95983 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.34■□□□□ 0.85
MBD3O95983 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD3O95983 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD3O95983 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.34■□□□□ 0.85
MBD3O95983 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.34■□□□□ 0.85
MBD3O95983 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.34■□□□□ 0.85
MBD3O95983 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
MBD3O95983 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
MBD3O95983 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
MBD3O95983 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3O95983 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MBD3O95983 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.33■□□□□ 0.85
MBD3O95983 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3O95983 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.33■□□□□ 0.85
MBD3O95983 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.33■□□□□ 0.85
MBD3O95983 AP003041.3-201ENST00000527151 707 ntBASIC20.33■□□□□ 0.85
MBD3O95983 C1QBPP2-201ENST00000528754 825 ntBASIC20.33■□□□□ 0.85
MBD3O95983 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3O95983 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
MBD3O95983 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
MBD3O95983 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
MBD3O95983 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
MBD3O95983 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD3O95983 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
MBD3O95983 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.33■□□□□ 0.84
MBD3O95983 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MBD3O95983 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MBD3O95983 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.32■□□□□ 0.84
MBD3O95983 CD177P1-201ENST00000606252 935 ntBASIC20.32■□□□□ 0.84
MBD3O95983 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.32■□□□□ 0.84
MBD3O95983 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 AC005915.1-201ENST00000624912 2018 ntBASIC20.32■□□□□ 0.84
MBD3O95983 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.32■□□□□ 0.84
MBD3O95983 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
MBD3O95983 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
MBD3O95983 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 LYSMD4-203ENST00000378904 2122 ntBASIC20.32■□□□□ 0.84
MBD3O95983 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
MBD3O95983 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
MBD3O95983 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
MBD3O95983 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
MBD3O95983 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms