Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
LTN1O94822 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 AC006116.8-202ENST00000587620 1550 ntBASIC23.29■■□□□ 1.32
LTN1O94822 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.29■■□□□ 1.32
LTN1O94822 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
LTN1O94822 IGHV3OR16-6-201ENST00000568775 360 ntBASIC23.29■■□□□ 1.32
LTN1O94822 MNT-208ENST00000575394 606 ntTSL 4 BASIC23.29■■□□□ 1.32
LTN1O94822 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC23.29■■□□□ 1.32
LTN1O94822 AC099522.2-201ENST00000607001 744 ntBASIC23.29■■□□□ 1.32
LTN1O94822 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
LTN1O94822 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
LTN1O94822 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 AL139400.1-201ENST00000366220 510 ntBASIC23.28■■□□□ 1.32
LTN1O94822 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
LTN1O94822 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC23.28■■□□□ 1.32
LTN1O94822 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC23.28■■□□□ 1.32
LTN1O94822 AC096734.2-201ENST00000562054 433 ntBASIC23.28■■□□□ 1.32
LTN1O94822 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
LTN1O94822 AP002472.1-201ENST00000577490 586 ntBASIC23.28■■□□□ 1.32
LTN1O94822 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 AC022145.2-201ENST00000598203 171 ntBASIC23.28■■□□□ 1.32
LTN1O94822 AC093028.1-201ENST00000622998 982 ntBASIC23.28■■□□□ 1.32
LTN1O94822 AC007064.4-201ENST00000637740 555 ntBASIC23.28■■□□□ 1.32
LTN1O94822 AL020996.1-203ENST00000536896 2307 ntBASIC23.28■■□□□ 1.32
LTN1O94822 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
LTN1O94822 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
LTN1O94822 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC23.28■■□□□ 1.32
LTN1O94822 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
LTN1O94822 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC23.27■■□□□ 1.32
LTN1O94822 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.27■■□□□ 1.32
LTN1O94822 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC23.27■■□□□ 1.32
LTN1O94822 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
LTN1O94822 AC023141.13-201ENST00000604991 943 ntBASIC23.27■■□□□ 1.32
LTN1O94822 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
LTN1O94822 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
LTN1O94822 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
LTN1O94822 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC23.27■■□□□ 1.32
LTN1O94822 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC23.27■■□□□ 1.32
LTN1O94822 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
LTN1O94822 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC23.27■■□□□ 1.32
LTN1O94822 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
LTN1O94822 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
LTN1O94822 AC023141.5-201ENST00000458585 616 ntBASIC23.27■■□□□ 1.32
LTN1O94822 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
LTN1O94822 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
LTN1O94822 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
LTN1O94822 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC23.26■■□□□ 1.31
LTN1O94822 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
LTN1O94822 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC23.26■■□□□ 1.31
LTN1O94822 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.26■■□□□ 1.31
LTN1O94822 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 AL645939.2-201ENST00000427340 991 ntBASIC23.26■■□□□ 1.31
LTN1O94822 PAWRP1-201ENST00000451083 565 ntBASIC23.26■■□□□ 1.31
LTN1O94822 AL513480.1-201ENST00000451731 511 ntBASIC23.26■■□□□ 1.31
LTN1O94822 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.26■■□□□ 1.31
LTN1O94822 CXCL1P1-201ENST00000502804 216 ntBASIC23.26■■□□□ 1.31
LTN1O94822 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC23.26■■□□□ 1.31
LTN1O94822 LINC02084-201ENST00000606069 1096 ntBASIC23.26■■□□□ 1.31
LTN1O94822 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
LTN1O94822 STK4-201ENST00000372801 2038 ntTSL 2 BASIC23.26■■□□□ 1.31
LTN1O94822 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
LTN1O94822 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
LTN1O94822 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
LTN1O94822 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.25■■□□□ 1.31
LTN1O94822 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 AC025580.3-201ENST00000617932 1424 ntBASIC23.25■■□□□ 1.31
LTN1O94822 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
LTN1O94822 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
LTN1O94822 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
LTN1O94822 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms