Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 AL031008.1-201ENST00000619963 541 ntBASIC16.67■□□□□ 0.26
PRAMEF2O60811 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRAMEF2O60811 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRAMEF2O60811 NOC2LP2-201ENST00000407594 1944 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AC100803.2-201ENST00000562459 1963 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 KRT16P4-201ENST00000453883 522 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AL160237.2-201ENST00000556165 472 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AL353801.3-201ENST00000609898 542 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AC018470.1-201ENST00000624790 3129 ntBASIC16.66■□□□□ 0.26
PRAMEF2O60811 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRAMEF2O60811 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.66■□□□□ 0.26
PRAMEF2O60811 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRAMEF2O60811 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.65■□□□□ 0.26
PRAMEF2O60811 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms