Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 MRPL3P1-201ENST00000400109 1033 ntBASIC17.58■□□□□ 0.4
NOBOXO60393 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.58■□□□□ 0.4
NOBOXO60393 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
NOBOXO60393 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
NOBOXO60393 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.58■□□□□ 0.4
NOBOXO60393 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.58■□□□□ 0.4
NOBOXO60393 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
NOBOXO60393 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 AC139713.2-201ENST00000641328 2723 ntBASIC17.57■□□□□ 0.4
NOBOXO60393 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.57■□□□□ 0.4
NOBOXO60393 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NOBOXO60393 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
NOBOXO60393 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.57■□□□□ 0.4
NOBOXO60393 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.57■□□□□ 0.4
NOBOXO60393 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.57■□□□□ 0.4
NOBOXO60393 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.57■□□□□ 0.4
NOBOXO60393 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.57■□□□□ 0.4
NOBOXO60393 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
NOBOXO60393 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NOBOXO60393 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
NOBOXO60393 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.57■□□□□ 0.4
NOBOXO60393 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NOBOXO60393 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 AC008764.6-201ENST00000595909 2069 ntBASIC17.56■□□□□ 0.4
NOBOXO60393 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NOBOXO60393 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 RCN1P2-201ENST00000398357 915 ntBASIC17.56■□□□□ 0.4
NOBOXO60393 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.56■□□□□ 0.4
NOBOXO60393 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
NOBOXO60393 TP73-AS1-207ENST00000624167 988 ntBASIC17.56■□□□□ 0.4
NOBOXO60393 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NOBOXO60393 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
NOBOXO60393 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.56■□□□□ 0.4
NOBOXO60393 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NOBOXO60393 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.56■□□□□ 0.4
NOBOXO60393 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 TP73-AS1-210ENST00000637775 1455 ntBASIC17.56■□□□□ 0.4
NOBOXO60393 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NOBOXO60393 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOBOXO60393 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOBOXO60393 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.55■□□□□ 0.4
NOBOXO60393 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.55■□□□□ 0.4
NOBOXO60393 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NOBOXO60393 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOBOXO60393 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NOBOXO60393 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NOBOXO60393 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms