Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
HOXA2O43364 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 MRPL20P1-201ENST00000400819 433 ntBASIC18.88■□□□□ 0.61
HOXA2O43364 PMS2P2-201ENST00000425039 1128 ntBASIC18.88■□□□□ 0.61
HOXA2O43364 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXA2O43364 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.88■□□□□ 0.61
HOXA2O43364 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.88■□□□□ 0.61
HOXA2O43364 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.88■□□□□ 0.61
HOXA2O43364 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
HOXA2O43364 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HOXA2O43364 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXA2O43364 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 AP002414.1-201ENST00000391405 1147 ntBASIC18.87■□□□□ 0.61
HOXA2O43364 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HOXA2O43364 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXA2O43364 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXA2O43364 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.87■□□□□ 0.61
HOXA2O43364 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HOXA2O43364 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 AC100803.2-201ENST00000562459 1963 ntBASIC18.87■□□□□ 0.61
HOXA2O43364 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
HOXA2O43364 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.87■□□□□ 0.61
HOXA2O43364 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC18.87■□□□□ 0.61
HOXA2O43364 AC004790.2-201ENST00000623588 572 ntBASIC18.87■□□□□ 0.61
HOXA2O43364 AC097637.2-201ENST00000624096 1997 ntBASIC18.87■□□□□ 0.61
HOXA2O43364 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
HOXA2O43364 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.86■□□□□ 0.61
HOXA2O43364 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 DNAJB3-202ENST00000449667 1266 ntBASIC18.86■□□□□ 0.61
HOXA2O43364 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
HOXA2O43364 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXA2O43364 AL353135.1-201ENST00000606729 504 ntBASIC18.86■□□□□ 0.61
HOXA2O43364 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
HOXA2O43364 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 AC135776.1-201ENST00000319817 2481 ntBASIC18.86■□□□□ 0.61
HOXA2O43364 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXA2O43364 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
HOXA2O43364 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
HOXA2O43364 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HOXA2O43364 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXA2O43364 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXA2O43364 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HOXA2O43364 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms