Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.25■□□□□ 0.03
LYRM1O43325 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.25■□□□□ 0.03
LYRM1O43325 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
LYRM1O43325 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.25■□□□□ 0.03
LYRM1O43325 AL163051.1-201ENST00000569214 1512 ntBASIC15.25■□□□□ 0.03
LYRM1O43325 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LYRM1O43325 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.25■□□□□ 0.03
LYRM1O43325 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.25■□□□□ 0.03
LYRM1O43325 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LYRM1O43325 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYRM1O43325 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 AC092171.3-201ENST00000610122 2651 ntBASIC15.24■□□□□ 0.03
LYRM1O43325 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LYRM1O43325 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
LYRM1O43325 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 LYSMD4-203ENST00000378904 2122 ntBASIC15.24■□□□□ 0.03
LYRM1O43325 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
LYRM1O43325 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.24■□□□□ 0.03
LYRM1O43325 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LYRM1O43325 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.24■□□□□ 0.03
LYRM1O43325 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 AL662844.4-201ENST00000606367 2838 ntBASIC15.24■□□□□ 0.03
LYRM1O43325 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LYRM1O43325 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.23■□□□□ 0.03
LYRM1O43325 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
LYRM1O43325 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LYRM1O43325 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LYRM1O43325 AL136379.1-201ENST00000623471 2642 ntBASIC15.23■□□□□ 0.03
LYRM1O43325 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms