Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
MID1O15344 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
MID1O15344 RNA5SP415-201ENST00000517246 115 ntBASIC17.72■□□□□ 0.43
MID1O15344 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.72■□□□□ 0.43
MID1O15344 AC145285.3-201ENST00000564603 959 ntBASIC17.72■□□□□ 0.43
MID1O15344 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.72■□□□□ 0.43
MID1O15344 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.72■□□□□ 0.43
MID1O15344 TERC-201ENST00000602385 541 ntBASIC17.72■□□□□ 0.43
MID1O15344 GPALPP1-207ENST00000611650 899 ntBASIC17.72■□□□□ 0.43
MID1O15344 AC117500.6-201ENST00000624871 588 ntBASIC17.72■□□□□ 0.43
MID1O15344 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.72■□□□□ 0.43
MID1O15344 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MID1O15344 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MID1O15344 SIGLEC16-201ENST00000599858 1437 ntBASIC17.72■□□□□ 0.43
MID1O15344 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 AL353593.2-201ENST00000602529 1483 ntBASIC17.71■□□□□ 0.43
MID1O15344 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.71■□□□□ 0.43
MID1O15344 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.71■□□□□ 0.43
MID1O15344 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 AC006538.3-201ENST00000612495 578 ntBASIC17.71■□□□□ 0.43
MID1O15344 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.71■□□□□ 0.43
MID1O15344 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MID1O15344 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.71■□□□□ 0.43
MID1O15344 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
MID1O15344 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MID1O15344 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
MID1O15344 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.71■□□□□ 0.42
MID1O15344 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.71■□□□□ 0.42
MID1O15344 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
MID1O15344 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.7■□□□□ 0.42
MID1O15344 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 AC132938.5-201ENST00000624980 1813 ntBASIC17.7■□□□□ 0.42
MID1O15344 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
MID1O15344 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 AL020989.1-201ENST00000422979 469 ntBASIC17.7■□□□□ 0.42
MID1O15344 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.7■□□□□ 0.42
MID1O15344 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.7■□□□□ 0.42
MID1O15344 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.7■□□□□ 0.42
MID1O15344 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
MID1O15344 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
MID1O15344 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 PMS2P7-201ENST00000506558 1336 ntBASIC17.7■□□□□ 0.42
MID1O15344 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MID1O15344 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
MID1O15344 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.69■□□□□ 0.42
MID1O15344 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
MID1O15344 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
MID1O15344 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
MID1O15344 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms