Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
AP3B1O00203 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
AP3B1O00203 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.94■□□□□ 0.46
AP3B1O00203 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
AP3B1O00203 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 AC016396.2-201ENST00000562575 1417 ntBASIC17.93■□□□□ 0.46
AP3B1O00203 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.93■□□□□ 0.46
AP3B1O00203 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.93■□□□□ 0.46
AP3B1O00203 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
AP3B1O00203 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.93■□□□□ 0.46
AP3B1O00203 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.93■□□□□ 0.46
AP3B1O00203 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
AP3B1O00203 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
AP3B1O00203 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.93■□□□□ 0.46
AP3B1O00203 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3B1O00203 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3B1O00203 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 AL645608.8-201ENST00000606034 2086 ntBASIC17.92■□□□□ 0.46
AP3B1O00203 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
AP3B1O00203 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.92■□□□□ 0.46
AP3B1O00203 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3B1O00203 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.92■□□□□ 0.46
AP3B1O00203 GUSBP12-201ENST00000513727 720 ntBASIC17.92■□□□□ 0.46
AP3B1O00203 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
AP3B1O00203 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3B1O00203 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
AP3B1O00203 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.92■□□□□ 0.46
AP3B1O00203 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.92■□□□□ 0.46
AP3B1O00203 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
AP3B1O00203 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
AP3B1O00203 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
AP3B1O00203 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
AP3B1O00203 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3B1O00203 AC141586.5-201ENST00000624546 2050 ntBASIC17.91■□□□□ 0.46
AP3B1O00203 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.91■□□□□ 0.46
AP3B1O00203 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
AP3B1O00203 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3B1O00203 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.91■□□□□ 0.46
AP3B1O00203 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.91■□□□□ 0.46
AP3B1O00203 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
AP3B1O00203 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
AP3B1O00203 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
AP3B1O00203 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
AP3B1O00203 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms