Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
NPIPA3F8WFD2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 HLA-A-201ENST00000376802 1334 ntBASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NPIPA3F8WFD2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
NPIPA3F8WFD2 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA3F8WFD2 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms