Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
C4orf47A7E2U8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 FAM58CP-201ENST00000435741 640 ntBASIC17.28■□□□□ 0.36
C4orf47A7E2U8 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 RPS15P9-201ENST00000494093 319 ntBASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AC122714.2-201ENST00000502787 707 ntBASIC17.28■□□□□ 0.36
C4orf47A7E2U8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AC008667.4-201ENST00000607370 168 ntBASIC17.28■□□□□ 0.36
C4orf47A7E2U8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.28■□□□□ 0.36
C4orf47A7E2U8 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 BCAR1-209ENST00000546196 1340 ntBASIC17.27■□□□□ 0.36
C4orf47A7E2U8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ACTG1P14-201ENST00000446382 1122 ntBASIC17.27■□□□□ 0.36
C4orf47A7E2U8 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 MIR4745-201ENST00000577608 62 ntBASIC17.27■□□□□ 0.36
C4orf47A7E2U8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
C4orf47A7E2U8 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.27■□□□□ 0.35
C4orf47A7E2U8 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C4orf47A7E2U8 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AL020989.1-201ENST00000422979 469 ntBASIC17.26■□□□□ 0.35
C4orf47A7E2U8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C4orf47A7E2U8 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms