Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TBC1D3FA6NER0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 LAGE3P1-201ENST00000425356 484 ntBASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 RNA5SP415-201ENST00000517246 115 ntBASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AC145285.3-201ENST00000564603 959 ntBASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AC100803.2-201ENST00000562459 1963 ntBASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 AP002414.3-201ENST00000589352 1468 ntBASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TBC1D3FA6NER0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 KRT18P13-201ENST00000400056 1290 ntBASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 SPDYE21P-201ENST00000413323 827 ntBASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 PRYP5-201ENST00000451909 266 ntBASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 AC092865.5-201ENST00000545435 363 ntBASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.61■□□□□ 0.41
TBC1D3FA6NER0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms