Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 LINC01568-207ENST00000641790 1380 ntBASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 AL391807.1-203ENST00000604392 2365 ntBASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.86■□□□□ 0.45
TCRBV9S1A1TA0A576 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 RASA4DP-201ENST00000460726 1199 ntBASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 AC009154.2-201ENST00000621177 724 ntBASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TCRBV9S1A1TA0A576 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AL136038.4-201ENST00000603606 1261 ntBASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AC004263.2-201ENST00000617183 678 ntBASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.84■□□□□ 0.45
TCRBV9S1A1TA0A576 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 BX276092.7-203ENST00000637198 1536 ntBASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TCRBV9S1A1TA0A576 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms