Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC026396.1-201ENST00000419388 421 ntBASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 SAPCD2P3-201ENST00000455031 850 ntBASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 REXO1L6P-202ENST00000619970 1078 ntBASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC12.82□□□□□ -0.36
IGHV4-28A0A0C4DH34 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AKR1C7P-201ENST00000305623 895 ntBASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 FAM220CP-201ENST00000395253 831 ntBASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC132008.2-207ENST00000454517 770 ntBASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
IGHV4-28A0A0C4DH34 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms