Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC187A0A096LP49 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 MKNK2P1-201ENST00000437526 628 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 AC018845.2-201ENST00000568326 409 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 LINC02084-201ENST00000606069 1096 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 AC148477.5-201ENST00000625164 1645 ntBASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CCDC187A0A096LP49 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 HTR5BP-201ENST00000430851 1154 ntBASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 AC004790.2-201ENST00000623588 572 ntBASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 AC126763.1-201ENST00000552015 2118 ntBASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CCDC187A0A096LP49 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 CNN2P11-201ENST00000429351 262 ntBASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.72■□□□□ 0.27
CCDC187A0A096LP49 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms