Protein–RNA interactions for Protein: Q9Y6R1

SLC4A4, Electrogenic sodium bicarbonate cotransporter 1, humanhuman

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A4Q9Y6R1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 AC103564.2-201ENST00000432853 1299 ntBASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC4A4Q9Y6R1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 SRP19-202ENST00000445150 833 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 FDX1P1-201ENST00000449115 551 ntBASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 AD001527.2-201ENST00000622994 785 ntBASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC4A4Q9Y6R1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 PC-208ENST00000529047 1607 ntTSL 3 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC4A4Q9Y6R1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 AL049757.1-201ENST00000616842 1596 ntBASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 MRPL3P1-201ENST00000400109 1033 ntBASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 FAM197Y8-203ENST00000450145 560 ntBASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 AC019129.2-201ENST00000609837 1235 ntBASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.1■□□□□ 0.97
SLC4A4Q9Y6R1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms