Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHGB6Q9Y5F9 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 AC008687.5-201ENST00000593746 558 ntBASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
PCDHGB6Q9Y5F9 AL139384.1-201ENST00000612143 3047 ntBASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 KRT8P50-201ENST00000562022 1438 ntBASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 AL121772.3-201ENST00000610840 674 ntBASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
PCDHGB6Q9Y5F9 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 AC004870.1-201ENST00000315132 882 ntBASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 GUSBP12-201ENST00000513727 720 ntBASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 IGHV3-41-201ENST00000613121 348 ntBASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDHGB6Q9Y5F9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms