Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AKR1C7P-201ENST00000305623 895 ntBASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AL353692.3-201ENST00000407031 1396 ntBASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDHB1Q9Y5F3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 HLA-A-201ENST00000376802 1334 ntBASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 Z69720.1-201ENST00000601483 472 ntBASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 AL671883.3-201ENST00000603274 991 ntBASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDHB1Q9Y5F3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB1Q9Y5F3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB1Q9Y5F3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
PCDHB1Q9Y5F3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB1Q9Y5F3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDHB1Q9Y5F3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHB1Q9Y5F3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHB1Q9Y5F3 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms