Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AC010460.3-201ENST00000511359 1579 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 AL096828.2-201ENST00000567259 1965 ntBASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CTDP1Q9Y5B0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 GPALPP1-207ENST00000611650 899 ntBASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CTDP1Q9Y5B0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 BX005266.1-201ENST00000473402 457 ntBASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 TERC-201ENST00000602385 541 ntBASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTDP1Q9Y5B0 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 AC025062.2-201ENST00000605477 670 ntBASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTDP1Q9Y5B0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms