Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 UNC93B5-201ENST00000530315 699 ntBASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRCH1Q9Y2L9 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LRCH1Q9Y2L9 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 KRT18P16-201ENST00000510337 1294 ntBASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 AC104640.1-201ENST00000562617 2109 ntBASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LRCH1Q9Y2L9 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 AC092368.3-202ENST00000574180 1591 ntBASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 LINC00304-203ENST00000565008 1864 ntBASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRCH1Q9Y2L9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms