Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC091607.1-201ENST00000490318 1060 ntBASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 MIR3652-201ENST00000579335 131 ntBASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RPH3AQ9Y2J0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 AC233702.3-201ENST00000578656 1387 ntBASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 MTCL1P1-201ENST00000446207 792 ntBASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 AC074051.2-201ENST00000565115 352 ntBASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 Z69720.1-201ENST00000601483 472 ntBASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RPH3AQ9Y2J0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AC138028.4-201ENST00000564984 1845 ntBASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AC104819.1-201ENST00000504587 486 ntBASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 PRELID1P1-202ENST00000567272 903 ntBASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RPH3AQ9Y2J0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms