Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 IGHV3-47-201ENST00000425060 335 ntBASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 AC120114.3-201ENST00000611923 658 ntBASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 AL354751.1-201ENST00000412768 1863 ntBASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 HLA-A-201ENST00000376802 1334 ntBASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FNDC3AQ9Y2H6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 LINC00602-201ENST00000629776 2065 ntBASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 IGHGP-201ENST00000390555 1178 ntBASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.16■□□□□ 0.5
FNDC3AQ9Y2H6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
FNDC3AQ9Y2H6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
FNDC3AQ9Y2H6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
FNDC3AQ9Y2H6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
FNDC3AQ9Y2H6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
FNDC3AQ9Y2H6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms