Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.04□□□□□ -0.32
HHLA3Q9XRX5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AL513477.1-201ENST00000602865 2407 ntBASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
HHLA3Q9XRX5 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.02□□□□□ -0.32
HHLA3Q9XRX5 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 NEK4P2-201ENST00000580004 1012 ntBASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 MST1L-201ENST00000442552 2185 ntBASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
HHLA3Q9XRX5 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms