Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CHMP2BQ9UQN3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 AC124067.4-201ENST00000519691 2379 ntBASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 AC116407.2-201ENST00000613639 860 ntBASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CHMP2BQ9UQN3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 KRT8P47-201ENST00000604727 1398 ntBASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CHMP2BQ9UQN3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 AP000523.1-201ENST00000398242 1049 ntBASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 AC084018.2-201ENST00000613093 2607 ntBASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.08■□□□□ 0.48
CHMP2BQ9UQN3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms