Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBQLN1Q9UMX0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 AC079776.2-201ENST00000641154 1609 ntBASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 RNPS1P1-201ENST00000507437 918 ntBASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 AL773604.1-201ENST00000617417 272 ntBASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBQLN1Q9UMX0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 AC018712.1-201ENST00000455767 687 ntBASIC19■□□□□ 0.63
UBQLN1Q9UMX0 AC109462.3-201ENST00000573934 613 ntBASIC19■□□□□ 0.63
UBQLN1Q9UMX0 NKAPP1-205ENST00000585790 367 ntBASIC19■□□□□ 0.63
UBQLN1Q9UMX0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
UBQLN1Q9UMX0 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 SLC25A6P5-201ENST00000435663 894 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 AC002558.1-201ENST00000488906 803 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 AC021087.4-201ENST00000563761 564 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 AC073592.4-201ENST00000623827 446 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 HLA-A-201ENST00000376802 1334 ntBASIC18.99■□□□□ 0.63
UBQLN1Q9UMX0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms