Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 YBX2P1-201ENST00000394192 760 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 AC004832.2-201ENST00000426397 482 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 MIR3687-2-201ENST00000577708 61 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 STK25P1-201ENST00000585406 838 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 AC064836.3-201ENST00000607928 673 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 MIR3687-1-201ENST00000614492 61 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.1■□□□□ 0.81
FBXO40Q9UH90 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
FBXO40Q9UH90 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 AC009949.1-201ENST00000623048 1830 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 AC100803.2-201ENST00000562459 1963 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 RPSAP43-201ENST00000402237 625 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 ELK2BP-201ENST00000415014 1224 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 GPX1P2-201ENST00000429271 606 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 STK19B-204ENST00000512515 211 ntBASIC20.09■□□□□ 0.81
FBXO40Q9UH90 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
FBXO40Q9UH90 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 AC002558.1-201ENST00000488906 803 ntBASIC20.08■□□□□ 0.81
FBXO40Q9UH90 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.08■□□□□ 0.81
FBXO40Q9UH90 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.08■□□□□ 0.81
FBXO40Q9UH90 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.08■□□□□ 0.8
FBXO40Q9UH90 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
FBXO40Q9UH90 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
FBXO40Q9UH90 AC006504.4-201ENST00000592118 1568 ntBASIC20.08■□□□□ 0.8
FBXO40Q9UH90 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 MYCLP1-201ENST00000372451 1075 ntBASIC20.07■□□□□ 0.8
FBXO40Q9UH90 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
FBXO40Q9UH90 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms