Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 INTS4P1-201ENST00000438455 1935 ntBASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 AC012313.1-201ENST00000593393 3059 ntBASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
HDAC6Q9UBN7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 PMS2P1-201ENST00000431037 1228 ntBASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 AC125634.1-201ENST00000438758 1403 ntBASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
HDAC6Q9UBN7 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 RBM17P3-201ENST00000417687 1192 ntBASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 HNRNPDP1-201ENST00000439535 754 ntBASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 AC093909.1-201ENST00000504731 1122 ntBASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 MIR7706-201ENST00000613747 67 ntBASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.05■□□□□ 0.8
HDAC6Q9UBN7 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 AC020916.1-201ENST00000587762 1774 ntBASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 AC073648.2-201ENST00000510116 352 ntBASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 AC011467.2-201ENST00000598425 242 ntBASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
HDAC6Q9UBN7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms