Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.99■□□□□ 0.47
NCKIPSDQ9NZQ3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 GUSBP12-201ENST00000513727 720 ntBASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 IFNL4P1-201ENST00000607083 540 ntBASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 KRT89P-201ENST00000620027 1478 ntBASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 AC009102.3-201ENST00000623118 1491 ntBASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.98■□□□□ 0.47
NCKIPSDQ9NZQ3 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 FDX1P1-201ENST00000449115 551 ntBASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 AC024563.2-201ENST00000603282 481 ntBASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.97■□□□□ 0.47
NCKIPSDQ9NZQ3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 MIR149-201ENST00000384879 89 ntBASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCKIPSDQ9NZQ3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms