Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
KCNIP1Q9NZI2 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 AC024563.2-201ENST00000603282 481 ntBASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
KCNIP1Q9NZI2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 GCSHP2-201ENST00000560971 527 ntBASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.93□□□□□ -0.02
KCNIP1Q9NZI2 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 LINC00167-201ENST00000530583 1419 ntBASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 AL596275.1-201ENST00000423464 877 ntBASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 AC145285.6-201ENST00000604632 637 ntBASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 KRT89P-201ENST00000620027 1478 ntBASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCNIP1Q9NZI2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms