Protein–RNA interactions for Protein: Q9NZ63

C9orf78, Telomere length and silencing protein 1 homolog, humanhuman

Predicted RBP Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78Q9NZ63 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC22.26■■□□□ 1.15
C9orf78Q9NZ63 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AC103564.2-201ENST00000432853 1299 ntBASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 SRP19-202ENST00000445150 833 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AL390961.4-201ENST00000623958 2535 ntBASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22.25■■□□□ 1.15
C9orf78Q9NZ63 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 SOD2-201ENST00000337404 991 ntTSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 FDX1P1-201ENST00000449115 551 ntBASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 FGFR3P6-201ENST00000457012 610 ntBASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 TP73-AS1-207ENST00000624167 988 ntBASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 BX276092.7-203ENST00000637198 1536 ntBASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 PAN3-AS1-201ENST00000563843 1351 ntBASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
C9orf78Q9NZ63 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 FAM197Y8-203ENST00000450145 560 ntBASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AP000867.4-201ENST00000641616 219 ntBASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.23■■□□□ 1.15
C9orf78Q9NZ63 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms