Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 HCG11-201ENST00000411553 5696 ntBASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 SIRPAP1-201ENST00000448467 1770 ntBASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SPHK1Q9NYA1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 DDX43P3-201ENST00000441064 443 ntBASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 REXO1L6P-202ENST00000619970 1078 ntBASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
SPHK1Q9NYA1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 AC008764.6-201ENST00000595909 2069 ntBASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SPHK1Q9NYA1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 AC122714.2-201ENST00000502787 707 ntBASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 AF238378.1-201ENST00000526806 358 ntBASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 AP001269.4-201ENST00000609611 512 ntBASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
SPHK1Q9NYA1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.07■□□□□ 0.32
SPHK1Q9NYA1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms