Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 AD001527.2-201ENST00000622994 785 ntBASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TMEM248Q9NWD8 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 AL355312.1-201ENST00000407115 2176 ntBASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
TMEM248Q9NWD8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 AC133963.1-201ENST00000504166 1679 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 HLA-J-201ENST00000462773 1622 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 AL353593.2-201ENST00000602529 1483 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 ABCD1P5-201ENST00000445663 754 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 AC132008.2-207ENST00000454517 770 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 IFNL4P1-201ENST00000607083 540 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 AC067852.2-201ENST00000590513 2313 ntBASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
TMEM248Q9NWD8 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 AL450487.1-201ENST00000426799 995 ntBASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 KRT126P-201ENST00000549467 1181 ntBASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.09■□□□□ 0.49
TMEM248Q9NWD8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms