Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 AL138831.2-201ENST00000606564 490 ntBASIC17.69■□□□□ 0.42
TREX1Q9NSU2 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.69■□□□□ 0.42
TREX1Q9NSU2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 AC007967.3-201ENST00000434308 558 ntBASIC17.68■□□□□ 0.42
TREX1Q9NSU2 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 FZD10-202ENST00000539839 3282 ntBASIC17.68■□□□□ 0.42
TREX1Q9NSU2 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TREX1Q9NSU2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 AC002558.1-201ENST00000488906 803 ntBASIC17.67■□□□□ 0.42
TREX1Q9NSU2 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 IGHV3-41-201ENST00000613121 348 ntBASIC17.67■□□□□ 0.42
TREX1Q9NSU2 AC116407.4-201ENST00000623319 1061 ntBASIC17.67■□□□□ 0.42
TREX1Q9NSU2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.67■□□□□ 0.42
TREX1Q9NSU2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.67■□□□□ 0.42
TREX1Q9NSU2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TREX1Q9NSU2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms