Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 AL020989.1-201ENST00000422979 469 ntBASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 AC073648.2-201ENST00000510116 352 ntBASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 AC148477.8-201ENST00000624298 468 ntBASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CSNK1G1Q9HCP0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AF186996.4-201ENST00000467186 377 ntBASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AC025062.2-201ENST00000605477 670 ntBASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AL773604.1-201ENST00000617417 272 ntBASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 HLA-A-201ENST00000376802 1334 ntBASIC18.49■□□□□ 0.55
CSNK1G1Q9HCP0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 KLF4P1-201ENST00000412782 1185 ntBASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 AL022326.1-202ENST00000641533 845 ntBASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 AC148477.5-201ENST00000625164 1645 ntBASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CSNK1G1Q9HCP0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 AC009336.1-201ENST00000608941 1553 ntBASIC18.47■□□□□ 0.55
CSNK1G1Q9HCP0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms