Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 FZD10-202ENST00000539839 3282 ntBASIC15.54■□□□□ 0.08
CDH20Q9HBT6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 LINC00265-3P-201ENST00000447588 903 ntBASIC15.54■□□□□ 0.08
CDH20Q9HBT6 RN7SL606P-201ENST00000472779 293 ntBASIC15.54■□□□□ 0.08
CDH20Q9HBT6 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH20Q9HBT6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 Z69720.1-201ENST00000601483 472 ntBASIC15.53■□□□□ 0.08
CDH20Q9HBT6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 AC092119.3-201ENST00000612618 583 ntBASIC15.53■□□□□ 0.08
CDH20Q9HBT6 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CDH20Q9HBT6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CDH20Q9HBT6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms