Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 HLA-F-220ENST00000434407 884 ntBASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 AC009154.2-201ENST00000621177 724 ntBASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRTM1Q9HBL6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
LRTM1Q9HBL6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 TSPY12P-201ENST00000421279 868 ntBASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
LRTM1Q9HBL6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 AP001094.4-201ENST00000579008 2176 ntBASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 STARP1-201ENST00000397973 869 ntBASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 FAM8A6P-201ENST00000407496 1135 ntBASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 AC211429.1-201ENST00000415277 523 ntBASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.07■□□□□ 0.32
LRTM1Q9HBL6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms