Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 PP12613-201ENST00000424958 2230 ntBASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
LRRC40Q9H9A6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AL645929.1-201ENST00000420084 975 ntBASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 AL138688.1-201ENST00000624851 1594 ntBASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LRRC40Q9H9A6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 AC141586.5-201ENST00000624546 2050 ntBASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 BX276092.7-203ENST00000637198 1536 ntBASIC18.03■□□□□ 0.48
LRRC40Q9H9A6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 PKD1P1-201ENST00000458669 6805 ntBASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 REXO1L11P-201ENST00000620964 1927 ntBASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRRC40Q9H9A6 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC40Q9H9A6 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC40Q9H9A6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRRC40Q9H9A6 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms