Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 INVS-201ENST00000262456 2968 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC120024.1-201ENST00000562672 995 ntBASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.25□□□□□ -0.77
CYSTM1Q9H1C7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 KRT16P6-202ENST00000425692 1426 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC011700.1-201ENST00000610409 2627 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC061975.6-201ENST00000579045 1553 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC060814.1-201ENST00000554326 538 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC092296.2-201ENST00000589470 999 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 AC116353.5-201ENST00000638148 1699 ntBASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
CYSTM1Q9H1C7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms