Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AL645820.1-201ENST00000623445 1673 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AP003086.1-201ENST00000513207 1642 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OFD1P9Y-201ENST00000417699 1491 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 IQCJ-204ENST00000482126 1408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 OR11G2-201ENST00000357366 1038 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ITGB1BP2-201ENST00000373829 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 OR2K2-202ENST00000374428 1038 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 Y_RNA.535-201ENST00000384612 99 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 SETD4-204ENST00000399207 1160 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 RSL24D1P4-201ENST00000400938 484 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 OR2W2P-201ENST00000406313 909 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 SETP15-201ENST00000412724 337 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC097533.1-201ENST00000413478 479 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AL391730.1-201ENST00000413739 921 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AL365203.2-201ENST00000423444 196 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC012498.1-201ENST00000424037 437 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 PDPN-204ENST00000475043 849 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 FABP5P5-201ENST00000515537 406 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC023050.2-201ENST00000544968 387 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AL157394.1-201ENST00000562983 1224 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 MIR4449-201ENST00000578365 66 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01841-202ENST00000588438 523 ntTSL 3 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC124312.4-201ENST00000605533 310 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC091167.6-201ENST00000610689 413 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 HNRNPCL2-202ENST00000621994 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AC110057.1-201ENST00000636031 898 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 AL022069.1-201ENST00000568025 1636 ntBASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ADH1A-201ENST00000209668 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
KRTAP3-3Q9BYR6 ELAVL4-204ENST00000371823 1591 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 KIAA1328-203ENST00000586501 1577 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 MTND5P12-201ENST00000502851 1449 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 AC131274.2-201ENST00000580697 1507 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 AC016716.1-201ENST00000265882 708 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 RNU4-23P-201ENST00000362839 140 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 SNORA72.1-201ENST00000363485 129 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 TRAV6-201ENST00000390428 404 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 AL021407.1-201ENST00000404531 386 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 AL603908.1-201ENST00000406098 201 ntBASIC11.11□□□□□ -0.63
KRTAP3-3Q9BYR6 GLS-204ENST00000409428 816 ntTSL 2 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms