Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AC116353.5-201ENST00000638148 1699 ntBASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 HOMER2P1-201ENST00000455653 964 ntBASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 BX276092.7-203ENST00000637198 1536 ntBASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RSPO3Q9BXY4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 RN7SL606P-201ENST00000472779 293 ntBASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
RSPO3Q9BXY4 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RSPO3Q9BXY4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 AC097374.2-201ENST00000618617 1306 ntBASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 AL353801.3-201ENST00000609898 542 ntBASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RSPO3Q9BXY4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms