Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 RCN1P2-201ENST00000398357 915 ntBASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 KRT18P31-201ENST00000506277 1292 ntBASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM62Q9BVG3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 AC005104.2-201ENST00000427818 678 ntBASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 IGHV3-52-201ENST00000519770 353 ntBASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 AC111152.3-201ENST00000569699 673 ntBASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIM62Q9BVG3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 GNAS-203ENST00000306120 1878 ntBASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRIM62Q9BVG3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 AL691432.3-201ENST00000621860 400 ntBASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRIM62Q9BVG3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms