Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 AC068338.2-201ENST00000563278 1430 ntBASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PKNOX2Q96KN3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 AP002414.2-201ENST00000591780 3365 ntBASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 MIR638-201ENST00000385237 100 ntBASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 TSPY21P-201ENST00000433481 731 ntBASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.24■□□□□ 0.67
PKNOX2Q96KN3 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 CNN2P6-201ENST00000439038 900 ntBASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 NTF6G-201ENST00000591094 616 ntBASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 AC138028.4-201ENST00000564984 1845 ntBASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PKNOX2Q96KN3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PKNOX2Q96KN3 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms