Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
TIMD4Q96H15 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TIMD4Q96H15 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.91□□□□□ -0.02
TIMD4Q96H15 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TIMD4Q96H15 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC004408.2-201ENST00000623613 2777 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC103564.2-201ENST00000432853 1299 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC007967.3-201ENST00000434308 558 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 ABCD1P5-201ENST00000445663 754 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC073648.2-201ENST00000510116 352 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 AF238378.1-201ENST00000526806 358 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 MTDHP3-201ENST00000594186 672 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 AL355877.3-201ENST00000622820 899 ntBASIC14.9□□□□□ -0.02
TIMD4Q96H15 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.9□□□□□ -0.02
TIMD4Q96H15 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TIMD4Q96H15 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 AC122714.2-201ENST00000502787 707 ntBASIC14.89□□□□□ -0.03
TIMD4Q96H15 AC093909.1-201ENST00000504731 1122 ntBASIC14.89□□□□□ -0.03
TIMD4Q96H15 AC106795.1-205ENST00000512851 1056 ntBASIC14.89□□□□□ -0.03
TIMD4Q96H15 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TIMD4Q96H15 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 MED29-202ENST00000594368 1471 ntTSL 2 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.89□□□□□ -0.03
TIMD4Q96H15 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMD4Q96H15 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.88□□□□□ -0.03
TIMD4Q96H15 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMD4Q96H15 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.88□□□□□ -0.03
TIMD4Q96H15 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMD4Q96H15 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMD4Q96H15 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
TIMD4Q96H15 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TIMD4Q96H15 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms