Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.32■□□□□ 0.52
IFT43Q96FT9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
IFT43Q96FT9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 AP003733.1-201ENST00000491725 852 ntBASIC18.31■□□□□ 0.52
IFT43Q96FT9 AC113404.2-201ENST00000507884 177 ntBASIC18.31■□□□□ 0.52
IFT43Q96FT9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 AC092119.3-201ENST00000612618 583 ntBASIC18.31■□□□□ 0.52
IFT43Q96FT9 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 FLJ13224-201ENST00000313737 1514 ntBASIC18.31■□□□□ 0.52
IFT43Q96FT9 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.31■□□□□ 0.52
IFT43Q96FT9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
IFT43Q96FT9 LINC00602-201ENST00000629776 2065 ntBASIC18.3■□□□□ 0.52
IFT43Q96FT9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 CHCHD2P8-201ENST00000429873 447 ntBASIC18.3■□□□□ 0.52
IFT43Q96FT9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
IFT43Q96FT9 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IFT43Q96FT9 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.29■□□□□ 0.52
IFT43Q96FT9 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
IFT43Q96FT9 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms